The research in the Carracedo lab is aimed at deconstructing the essential requirements of cancer cells with special emphasis on the translation of the acquired knowledge from bench to bedside. In order to define the genuine features of cancer cells, we focus on the signalling and metabolic alterations in prostate and breast cancer. Through the use of a hierarchical approach with increasing complexity, we work on cell lines and primary cultures (using cell and molecular biology technologies), mouse models of prostate cancer that are faithful to the human disease and the analysis of human specimens through the development of prospective and retrospective studies. Our work stems from the hypothesis that cancer is driven by signalling and metabolic alterations that, once identified, can be targeted for therapy. The center and our collaborator institutions offer state-of-the-art technologies (from OMICS to in vivo imaging), which allow us to build and answer our hypotheses with high level of confidence.
To address our scientific questions in cancer, the Carracedo lab has developed a series of research lines:
- Bioinformatics-based discovery. The lab takes full advantage on publicly available human prostate and breast cancer datasets in order to identify candidate genes to contribute to cancer pathogenesis, progression and response to therapy. Best hits are then validated employing genetic mouse models, xenograft surrogate assays and the latest advances in cellular and molecular biology combined with OMICs technologies.
- Genetic mouse models as a source for the identification of novel cancer players. Genetically engineered mouse models (GEMMs) can faithfully recapitulate many aspects of human cancer. Dr. Carracedo envisions the molecular analysis of GEMMs with high throughput technologies as a mean to identify novel cancer-related genes. These hits are then validated through the analysis of human cancer specimens and cellular and molecular biology approaches.
- Multi-OMICs analysis for non-invasive biomarker identification. Biofluids are the perfect source for cancer biomarkers that can inform about the presence or features of cancer. The lab has undertaken a biomarker discovery approach by applying the latest OMICs technologies to biofluid specimens from well-annotated prostate cancer patients, in order to define better molecules that inform about this disease.
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Group Leader
Arkaitz Carracedo
ERC Consolidator Grant - Ikerbasque Research Professor Associate Principal Investigator -
Edurne Berra
Emerging Scientist -
Amaia Ercilla Eguiarte
Ikerbasque Research Fellow - Ramón y Cajal (RyC) Programme -
Marco Piva
Ikerbasque Research Fellow - Ramón y Cajal (RyC) Programme IKERBASQUE RESEARCH FELLOW -
Oihana Iriondo Martinez de Zuazo
Ikerbasque Research Fellow RESEARCH ASSISTANT -
Amaia Zabala Letona
AECC Researcher -
Natalia Martín Martín
POSTDOCTORAL RESEARCHER -
Jaione Auzmendi Iriarte
Juan de la Cierva Fellow -
Mikel Pujana Vaquerizo
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Blanca Calle Ciborro
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Laura Bozal Basterra
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Maider Fagoaga Eugui
TECHNICIANS / DOCTORAL CANDIDATES -
Onintza Carlevaris
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Belén Martínez La Osa
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Mikel Arana Castañares
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Encarnación Pérez Andrés
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Victoria Cid I Centelles
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Ianire Astobiza
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Irati Aguirre Vicente
AECC Predoctoral Fellow -
Sara Del Palacio Cimas
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María Ponce Rodríguez
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Saioa García Longarte
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Kathrin Keim
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Candela Gerediaga Ruiz de Velasco
Members
Latest Publications
Metabolic alterations driven by PFKFB3 upregulation confer resistance to trastuzumab in HER2-positive breast cancer.
Vincken, Roos; Pasco, Samuel T; Steri, Veronica; Bozal-Basterra, Laura; van IJcken, Wilfred F J; Carracedo, Arkaitz; Huylebroeck, Danny; Moasser, Mark M; Ruiz-Saenz, Ana;
BIOMEDICINE & PHARMACOTHERAPY
2026-05-11
Polyamine-dependent metabolic shielding regulates alternative splicing
Zabala-Letona, A; Pujana-Vaquerizo, M; Martinez-Laosa, B; Ponce-Rodriguez, M; Garcia-Longarte, S; Mendizabal, I; Gimeno, A; Rogalska, M; Tan, J; Cabrera, D; Van Liempd, S; Ximenez-Embun, P; ...
NATURE
2026-01-14
Role of CNNM4 in the progression of cholangiocarcinoma: implications for ferroptosis and therapeutic potential
Mercado-Gómez , M; Goikoetxea-Usandizaga, N; Giné, AE; Rodrigo, MAM; Afonso, MB; Azkargorta, M; Zapata-Pavas, LE; Rejano-Gordillo, CM; Romero, MR; Mendizabal, I; Rodrigues, PM; Wu, HH; Rodríguez-Agudo, ...
GUT
2025-08-05
Engineering a single-chain immunoglobulin scaffold loaded with a latent-releasable cytotoxic pore-forming peptide
Morillo, I; Zulaica, J; Caballero, AR; Auzmendi-Iriarte, J; Largo, E; Apellaniz, B; Carracedo, A; Piva, M; Nieva, JL; Rujas, E;
COMMUNICATIONS BIOLOGY
2025-11-25
Transcriptional network analysis of PTEN-protein-deficient prostate tumors reveals robust stromal reprogramming and signs of senescent paracrine communication
Rondon-Lorefice, I; Lopez, JI; Ugalde-Olano, A; Zufiaurre, M; Astobiza, I; Martin-Martin, N; Bozal-Basterra, L; Garcia-Longarte, S; Zabala-Letona, A; Rey, S; Santos-Martin, A; Unda, M; Loizaga-Iriarte, ...
MOLECULAR ONCOLOGY
2025-11-17
Age-and sex-specific lipoprotein profiles in general and cardiometabolic population cohorts
Conde, R; Gil-Redondo, R; Bizkarguenaga, M; Lodge, S; Nitschke, P; De Diego, A; González-Valle, B; Hui, JN; Hunter, ML; Yeap, BB; Cenarro, A; Lope, V; Habisch, H; Haudum, C; Verheyen, N; Obermayer-Pietsch, ...
EBIOMEDICINE
2025-11-08
Aggressive prostate cancer is associated with pericyte dysfunction
Martinez-Romero, A; Martinez-Larrinaga, A; Grego-Bessa, J; Garcia-Longarte, S; van Splunder, H; Astobiza, I; Ercilla, A; Bozal-Basterra, L; Mendizabal, I; Villacampa, P; Carracedo, A; Graupera, ...
MOLECULAR ONCOLOGY
2025-10-21
Unravelling the role of L-and Dalanine in prostate cancer: a Positron Emission Tomography study in a genetic mouse model
Castellnou, P; Gómez-Martínez, M; Gómez-Vallejo, V; Baz, Z; López-Gallego, F; Rondon-Lorefice, I; Zabala-Letona, A; Poot, AJ; Mendizabal, I; Carracedo, A; Rejc, L; Llop, J;
NUCLEAR MEDICINE AND BIOLOGY
2025-09-25
A bioinformatics screen identifies TCF19 as an aggressiveness-sustaining gene in prostate cancer
Ercilla, A; Crespo, JR; Garcia-Longarte, S; Fidalgo, M; del Palacio, S; Martin-Martin, N; Carlevaris, O; Astobiza, I; Fernández-Ruiz, S; Guiu, M; Bárcena, L; Mendizabal, I; Aransay, AM; Graupera, ...
MOLECULAR ONCOLOGY
2025-09-15
Transcriptional analysis of metastatic hormone-naïve prostate cancer primary tumor biopsies reveals a relevant role for SOX11 in prostate cancer cell dissemination
Martin-Martin, N; Garcia-Longarte, S; Corres-Mendizabal, J; Lazcano, U; Astobiza, I; Bozal-Basterra, L; Herranz, N; van Splunder, H; Carlevaris, O; Pujana-Vaquerizo, M; Blasco, MT; Aransay, ...
GENOME BIOLOGY
2025-06-03
Secreted spermidine synthase reveals a paracrine role for PGC1α-induced growth suppression in prostate cancer
Schaub-Clerigué, A; Hermanova, I; Pintor-Rial, A; Sydorenko, M; Valcarcel-Jimenez, L; Macchia, A; Lectez, B; Garcia-Longarte, S; Fagoaga-Eugui, M; Astobiza, I; Martín-Martín, N; Zabala-Letona, ...
CELL DEATH & DISEASE
2025-04-23
Syndecan-3 positively regulates the pro-inflammatory function of macrophages
Lee, SY; Prieto-Fernández, E; Egia-Mendikute, L; Antonaña-Vildosola, A; Velasco-Beltrán, P; Bosch, A; Jimenez-Lasheras, B; de Blas, A; de Durana, JED; Valdaliso-Díez, E; Bozal-Basterra, L; Ercilla, ...
CELLULAR AND MOLECULAR LIFE SCIENCES
2025-04-07
A class I PI3K signalling network regulates primary cilia disassembly in normal physiology and disease
Conduit, SE; Pearce, W; Bhamra, A; Bilanges, B; Bozal-Basterra, L; Foukas, LC; Cobbaut, M; Castillo, SD; Danesh, MA; Adil, M; Carracedo, A; Graupera, M; McDonald, NQ; Parker, PJ; Cutillas, PR; ...
NATURE COMMUNICATIONS
2024-08-21
MetSCORE: a molecular metric to evaluate the risk of metabolic syndrome based on serum NMR metabolomics
Gil-Redondo, R; Conde, R; Bruzzone, C; Seco, ML; Bizkarguenaga, M; González-Valle, B; de Diego, A; Lain, A; Habisch, H; Haudum, C; Verheyen, N; Obermayer-Pietsch, B; Margarita, S; Pelusi, S; ...
CARDIOVASCULAR DIABETOLOGY
2024-07-24
Metastatic hormone-naïve prostate cancer: a distinct biological entity
Corres-Mendizabal, J; Zacchi, F; Martín-Martín, N; Mateo, J; Carracedo, A;
TRENDS IN CANCER
2024-07-23
The PP2A regulator IER5L supports prostate cancer progression
Crespo, JR; Martín-Martín, N; Garcia-Longarte, S; Corres-Mendizabal, J; Carlevaris, O; Astobiza, I; Zabala-Letona, A; Guiu, M; Azkargorta, M; Gonzalez-Lopez, M; Macías-Cámara, N; Doan, P; Elortza, ...
CELL DEATH & DISEASE
2024-07-18
Metabolic adaptations in prostate cancer
Pujana-Vaquerizo, M; Bozal-Basterra, L; Carracedo, A;
BRITISH JOURNAL OF CANCER
2024-07-05
SERS analysis of cancer cell- secreted purines reveals a unique paracrine crosstalk in MTAP- deficient tumors
Valera, PS; Plou, J; Garcia, I; Astobiza, I; Viera, C; Aransay, AM; Martin, JE; Sasselli, IR; Carracedo, A; Liz-Marzan, LM;
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
2023-12-26
STAT3/LKB1 controls metastatic prostate cancer by regulating mTORC1/CREB pathway
Pencik, J; Philippe, C; Schlederer, M; Atas, E; Pecoraro, M; Grund-Gröchke, S; Li, W; Tracz, A; Heidegger, I; Lagger, S; Trachtová, K; Oberhuber, M; Heitzer, E; Aksoy, O; Neubauer, HA; Wingelhofer, ...
MOLECULAR CANCER
2023-08-12
METTL1 promotes tumorigenesis through tRNA-derived fragment biogenesis in prostate cancer
García-Vilchez, R; Anazco-Guenkova, AM; Dietmann, S; López, J; Morón-Calvente, V; DAmbrosi, S; Nombela, P; Zamacola, K; Mendizabal, I; García-Longarte, S; Zabala-Letona, A; Astobiza, I; Fernández, ...
MOLECULAR CANCER
2023-07-29
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Group Leader
Juan Manuel Falcón
Ikerbasque Research Professor SPECIALIST -
Sebastiaan Martijn Van Liempd
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Oihane Elena Albóniga Díez
TECHNICIANS / DOCTORAL CANDIDATES -
Diana Cabrera
Members
Latest Publications
Defining the reference proteomes for small extracellular vesicles and non-vesicular components
Morales-Sanfrutos, J; Etxeberria-Ugartemendia, J; Barroso-Gomila, O; González, E; Sendino, M; Ximénez-Embún, P; García, F; Zarzuela, E; Falcón-Pérez, JM; Peinado, H; Muñoz, J;
NATURE CELL BIOLOGY
2026-02-13
Updating MISEV: When, What, How, and Why?
Akbar, N; Burger, D; Bussolati, B; Buzás, EI; Carney, RP; Cho, Y-; Driedonks, TAP; Falcon-Perez, JM; Fujita, Y; Goberdhan, DC; Hendrix, A; Huang, YY; Mathivanan, S; Mahoney, MG; Mohanty, S; ...
JOURNAL OF EXTRACELLULAR VESICLES
2026-01-29
Immune and Endothelial-Related Extracellular Vesicles Are Associated with Corticosteroid Response and Mortality in Alcohol-Associated Hepatitis
Guinart-Cuadra, A; Brujats, A; Szafranska, J; Guerrero, R; Dinamarca, F; Cantó, E; Poca, M; Román, E; Sánchez-Ardid, E; Fajardo, J; Camps, M; Mulet, M; Soriano, G; Escorsell, A; Falcon-Perez, ...
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
2026-01-27
From Lab to Industry: Advancing the Translational Potential of Extracellular Vesicles Through the ISEV Translation, Regulation and Advocacy Committee (ISEV-TRA)
Gurriaran-Rodriguez, U; Bussolati, B; Gimona, M; Glebov, K; Fujita, Y; Marcilla, A; Neri, C; Fu, QL; Das, S; Pluchino, S; Zarovni, N; Salomon, C; Witwer, K; Falcon-Perez, JM;
JOURNAL OF EXTRACELLULAR VESICLES
2026-01-14
Polyamine-dependent metabolic shielding regulates alternative splicing
Zabala-Letona, A; Pujana-Vaquerizo, M; Martinez-Laosa, B; Ponce-Rodriguez, M; Garcia-Longarte, S; Mendizabal, I; Gimeno, A; Rogalska, M; Tan, J; Cabrera, D; Van Liempd, S; Ximenez-Embun, P; ...
NATURE
2026-01-14
Deciphering the dialogue between the bovine blastocyst and the uterus: embryo-induced alterations in extracellular vesicle protein content from an ex vivo model and the in vivo environment
Mazzarella, R; Sánchez, JM; Egido, SG; McDonald, M; Alvarez-Barrientos, A; González, E; Falcón-Pérez, JM; Azkargorta, M; Elortza, F; González, ME; Lonergan, P; Rizos, D; Fernandez-Fuertes, B; ...
JOURNAL OF ANIMAL SCIENCE AND BIOTECHNOLOGY
2025-10-24
To a liquid brain biopsy of people with multiple sclerosis: extracellular vesicles as circulating biomarkers
Bravo-Miana, RD; Arizaga-Echebarria, JK; Azkargorta, M; Ascensión, AM; Velasco, HC; González, E; Falcón-Pérez, JM; Triviño, TC; Elortza, F; Pérez-González, R; Otaegui, D;
MULTIPLE SCLEROSIS JOURNAL
2025-09-01
Roadblocks of Urinary EV Biomarkers: Moving Toward the Clinic
Droste, M; Puhka, M; van Royen, ME; Ng, MSY; Blijdorp, C; Alvarez-Llamas, G; Borras, FE; Buescher, AK; Bussolati, B; Dear, JW; Falcon-Perez, JM; Giebel, B; Grange, C; Hoorn, EJ; Leivo, J; Lenassi, ...
JOURNAL OF EXTRACELLULAR VESICLES
2025-07-17
Metabolic Signature in Combination with Fecal Immunochemical Test as a Non-Invasive Tool for Advanced Colorectal Neoplasia Diagnosis
Albóniga, OE; Cubiella, J; Bujanda, L; Aspichueta, P; Blanco, ME; Lanza, BR; Alonso, C; Falcón-Pérez, JM;
CANCERS
2025-07-15
Embryo-Induced Changes in the Protein Profile of Bovine Oviductal Extracellular Vesicles
Mazzarella, R; Sánchez, J; Fernandez-Fuertes, B; Egido, SG; McDonald, M; Alvarez-Barrientos, A; González, E; Falcón-Pérez, JM; Azkargorta, M; Elortza, F; González, ME; Lonergan, P; Rizos, D; ...
MOLECULAR & CELLULAR PROTEOMICS
2025-04-01
Intra and inter-organ communication through extracellular vesicles in obesity: functional role of obesesomes and steatosomes
Lago-Baameiro, N; Camino, T; Vazquez-Durán, A; Sueiro, A; Couto, I; Santos, F; Baltar, J; Falcón-Pérez, JM; Pardo, M;
JOURNAL OF TRANSLATIONAL MEDICINE
2025-02-20
Metabolic Profiling of Brain Tissue and Brain-Derived Extracellular Vesicles in Alzheimer's Disease
Hernandez, P; Rackles, E; Alboniga, OE; Martínez-Lage, P; Camacho, EN; Onaindia, A; Fernandez, M; Talamillo, A; Falcon-Perez, JM;
JOURNAL OF EXTRACELLULAR VESICLES
2025-02-01
Reproducibility of extracellular vesicle research
Crescitelli, R; Falcon-Perez, J; Hendrix, A; Lenassi, M; Minh, LN; Ochiya, T; Hooten, NN; Sandau, U; Théry, C; Nieuwland, R;
JOURNAL OF EXTRACELLULAR VESICLES
2025-01-01
Systemic messenger RNA replacement therapy is effective in a novel clinically relevant model of acute intermittent porphyria developed in non-human primates
Córdoba, KM; Jericó, D; Jiang, L; Collantes, M; Alegre, M; García-Ruiz, L; Manzanilla, O; Sampedro, A; Herranz, JM; Insausti, I; de la Cuesta, AM; Urigo, F; Alcaide, P; Morán, M; Martín, MA; ...
GUT
2025-01-17
Beyond basic characterization and omics: Immunomodulatory roles of platelet-derived extracellular vesicles unveiled by functional testing
Palviainen, M; Puutio, J; Ostergaard, RH; Eble, JA; Maaninka, K; Butt, U; Ndika, J; Kari, OK; Kamali-Moghaddam, M; Kjaer-Sorensen, K; Oxvig, C; Aransay, AM; Falcon-Perez, JM; Federico, A; Greco, ...
JOURNAL OF EXTRACELLULAR VESICLES
2024-10-01
Extracellular vesicles in tumor-adipose tissue crosstalk: key drivers and therapeutic targets in cancer cachexia
Ramos, CC; Pires, J; Gonzalez, E; Garcia-Vallicrosa, C; Reis, CA; Falcon-Perez, JM; Freitas, D;
EXTRACELLULAR VESICLES AND CIRCULATING NUCLEIC ACIDS
2024-09-01
Increased levels of circulating cell-free double-stranded nucleic acids in the plasma of glioblastoma patients
Rackles, E; Zaccheroni, E; Lopez, PH; Faletti, S; Del Bene, M; DiMeco, F; Pelicci, G; Falcon-Perez, JM;
JOURNAL OF EXTRACELLULAR BIOLOGY
2024-08-02
Cryogenic electron microscopy reveals morphologically distinct subtypes of extracellular vesicles among porcine ejaculate fractions
Parra, A; Barranco, I; Martínez-Díaz, P; González, E; Albóniga, OE; Cabrera, D; Falcón-Pérez, JM; Roca, J;
SCIENTIFIC REPORTS
2024-07-13
Three-Dimensional Hepatocyte Spheroids: Model for Assessing Chemotherapy in Hepatocellular Carcinoma
Royo, F; Garcia-Vallicrosa, C; Azparren-Angulo, M; Bordanaba-Florit, G; Lopez-Sarrio, S; Falcon-Perez, JM;
BIOMEDICINES
2024-05-28
Integration of proteomic and metabolomic analysis reveal distinct metabolic alterations of prostate cancer-associated fibroblasts compared to normal fibroblasts from patient's stroma samples
Bordanaba-Florit, G; Royo, F; Albóniga, OE; Clayton, A; Falcón-Pérez, JM; Webber, J;
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE
2024-05-10

